Check the atomikos-jta-spring examples bundled in the distribution ZIP file. This should get you started with using Spring.
Another good source of information on the subject is this webinar: http://media.techtarget.com/tss/BeJUG/J2EEAppsSpring/player.html
Also see http://www.atomikos.com/Publications and consider purchasing development support (targeted at exactly this kind of problems).
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